Graduate Course Catalog

16:160:501 - Chemistry of Heterocyclic Compounds

16:160:501 Chemistry of Heterocyclic Compounds (3)
Covers p-deficient (pyridine type) and p-excessive (pyrrole type) heterocyclic compounds. Emphasis on synthesis, reactivity, rearrangements, utility (in general organic synthesis), and biological activity. Prerequisites: 01:160:307, 308, or equivalent.

16:160:503 - Modern Synthetic Organic Chemistry

16:160:503 Modern Synthetic Organic Chemistry (3)
Survey of preparative methods in organic chemistry and their application to the synthesis of complex molecules. Prerequisite: one year of undergraduate organic chemistry.

16:160:504 - Recent Advances in Organic Chemistry

16:160:504  Recent Advances in Organic Chemistry (3)
Selected newer topics discussed at an advanced level. Prerequisite: 16:160:511.

16:160:506 - Advanced Organic Synthesis

16:160:506  Advanced Organic Synthesis (3)
The logic and art of complex natural products synthesis and of modern process synthesis. Prerequisite: 16:160:503.

16:160:509 - Organic Chemistry of High Polymers

16:160:509  Organic Chemistry of High Polymers (3)
Introduction to the synthesis and reactions of macromolecules, free-radical polymerization, stereospecific polymerization, and stepwise polymerization. Prerequisites: 01:160:307, 308 and 327, 328, or equivalent.

16:160:510 - Introduction to Molecular Modeling

16:160:510 Introduction to Molecular Modeling (3)
Introduction to the use of computer-assisted molecular modeling techniques for the study of chemical problems; lectures on theoretical principles; instruction in use of modern modeling programs; computer projects involving solution of chemical problems. Prerequisites: 01:160:307, 308, 323, 324, or equivalent.

16:160:511 - Advanced Organic Chemistry I

16:160:511 Advanced Organic Chemistry I (3)
Advanced survey of organic chemistry; molecular orbital theory, orbital symmetry correlations, structure and stereochemistry of organic molecules, chemistry of reactive intermediates, structure-reactivity relationships, molecular rearrangements. Prerequisites: 01:160:307, 308, or equivalent.

16:160:512 - Advanced Organic Chemistry II

16:160:512 Advanced Organic Chemistry II (3)
Advanced survey of organic chemistry; molecular orbital theory, orbital symmetry correlations, structure and stereochemistry of organic molecules, chemistry of reactive intermediates, structure-reactivity relationships, molecular rearrangements. Prerequisites: 01:160:307, 308, or equivalent.

16:160:513 - Advanced Organic Chemistry III

16:160:513  Advanced Organic Chemistry III (3)
Advanced survey of organic chemistry; molecular orbital theory, orbital symmetry correlations, structure and stereochemistry of organic molecules, chemistry of reactive intermediates, structure-reactivity relationships, molecular rearrangements. Prerequisites: 01:160:307, 308, or equivalent.

16:160:515 - Interpretation of Organic Spectra

16:160:515 Interpretation of Organic Spectra (3)
Use of nuclear magnetic resonance, mass spectrometry, and infrared and ultraviolet spectroscopy for the identification of organic compounds and the elucidation of organic reaction mechanisms. Prerequisites: 01:160:307,308, or equivalent.

16:160:518 - Bioorganic Mechanisms

16:160:518 Bioorganic Mechanisms (3)
Catalysis of organic reactions that are model systems for enzymatic processes. Emphasis on mechanisms of enzyme-catalyzed reactions. Prerequisites: 01:160:307, 308 and 327, 328, or equivalent; 16:160:511.

16:160:520 - Mathematical Methods of Chemistry

16:160:520Mathematical Methods of Chemistry (3)
Selected aspects of infinite series, vectors and matrices, functions of a complex variable, differential equations, and integral transforms as used in chemistry.

16:160:521 - Atomic and Molecular Structure

16:160:521Atomic and Molecular Structure (3)
Introduction to the ideas of quantum chemistry and their application to the structure and properties of atoms and molecules. Prerequisites: 01:160:327, 328, or equivalent.

16:160:522 - Statistical Mechanics

16:160:522 Statistical Mechanics (3)
Basic concepts and methods of equilibrium statistical mechanics. Applications to systems and phenomena of chemical interest, including ideal and real gases, chemical equilibria, phase transitions, classical liquids, and polymer solutions. Prerequisites: 01:160:327, 328, or equivalent.

16:160:525 - Chemical Thermodynamics

16:160:525 Chemical Thermodynamics (3)
Principles of classical and statistical thermodynamics and their application to the study of homogeneous and heterogeneous equilibria. Prerequisites: 01:160:327, 328, or equivalent.

16:160:526 - Physical Chemistry of Solutions

16:160:526 Physical Chemistry of Solutions (3)
Thermodynamics and statistical thermodynamic properties of solutions; Brownian motion and diffusion; Debye-Huckel theory of electrolytes. Prerequisite: 16:160:525.

16:160:527 - Physical Chemistry of High Polymers

16:160:527 Physical Chemistry of High Polymers (3)
Introduction to the physical chemistry of macromolecules aimed at understanding relations between molecular structure and physical properties of high polymers. Prerequisites: 01:160:327,328, or equivalent.

16:160:528 - Physical Chemistry of High Polymers

16:160:528 Physical Chemistry of High Polymers (3)
Introduction to the physical chemistry of macromolecules aimed at understanding relations between molecular structure and physical properties of high polymers. Prerequisites: 01:160:327,328, or equivalent.

16:160:529 - Molecular Spectroscopy

16:160:529 Molecular Spectroscopy (3)
Principles of electronic and vibrational spectroscopy of polyatomic molecules. Emphasis on the quantum-mechanical basis of the spectra and the ways in which spectra yield information about molecular properties. Prerequisite: 16:160:521. Corequisite: 16:160:532.

16:160:531 - Photochemistry

16:160:531 Photochemistry (3)
Absorption of light; formation of electronically excited states and their subsequent chemical reactions; fluorescence, phosphorescence, and quantum yields; applications of photochemistry to organic systems. Prerequisites: 01:160:307, 308 and 327, 328, or equivalent.

16:160:532 - Quantum Mechanics

16:160:532 Quantum Mechanics (3)
Introduction to the principles of quantum mechanics with emphasis on operator approaches and the angular momentum problem. Approximate methods and application to simple examples. Prerequisites: 16:160:520, 521.

16:160:533 - Chemical Applications of Group Theory

16:160:533 Chemical Applications of Group Theory (3)
Aspects and consequences of molecular symmetry; point groups and character tables; group theory and quantum mechanics; symmetry aspects of the electronic structure in organic and inorganic molecules; selection rules for electronic and vibrational spectroscopy; ligand field theory. Prerequisite: 16:160:521 or equivalent.

16:160:534 - Chemical Kinetics

16:160:534Chemical Kinetics (3)
Chemical reaction rates, theories of molecular transformations, and the elucidation of reaction mechanisms. Prerequisites: 01:160:327,328, or equivalent.

16:160:536 - Crystal and Molecular Structure I, II

16:160:536 Crystal and Molecular Structure I, II (3,3)
Symmetry of crystals; point and space groups. Determination of crystal structure by X-ray diffraction. Analysis of X-ray photographic and diffractometer data and its processing. Prerequisites: 01:160:327, 328, or equivalent. See also 16:635:564.

16:160:537 - Biophysical Chemistry I

16:160:537 Biophysical Chemistry I (3)
Introduction to the physical chemistry of proteins, nucleic acids, and their complexes. Forces that determine biopolymer structure. Principles of protein and nucleic acid structure. Transitions and interactions of biopolymers. Prerequisites: 01:160:327, 328, or equivalent.

16:160:538 - Biophysical Chemistry II

16:160:538 Biophysical Chemistry II (3)
Introduction to biophysical techniques used in the study of structure and function. Theoretical methods of macromolecular analysis. Methods of macromolecular engineering and design. Prerequisite: 16:160:537 or equivalent.

16:160:539 - Protein Engineering and Design

16:160:539  Protein Engineering and Design (3)
Protein structure. Protein structure-function relationships. Protein engineering methods. Protein engineering to modify the properties of existing useful proteins (e.g., ligand recognition, catalysis, allostery, stability) and to create new useful proteins. Catalytic antibodies. Semisynthetic proteins. Denovo protein design. Prerequisites: 01:160:307, 308 and 11:115:403, 404, or equivalent, or permission of instructor; 16:160:537 strongly recommended.

16:160:540 - Single-Crystal X-Ray Analysis Laboratory

16:160:540 Single-Crystal X-Ray Analysis Laboratory (1)
Laboratory course to accompany 16:160:536. Characterization of crystals and introduction to diffractometry. Prerequisite: 16:160:535. Corequisite: 16:160:536.

16:160:541-542 - Special Topics in Physical Chemistry

16:160:541-542 Special Topics in Physical Chemistry (BA, BA)
Advanced topics of current interest. Prerequisites: 01:160:327,328, or equivalent.

16:160:544 - Special Topics in Biological Chemistry

16:160:544 Special Topics in Biological Chemistry (1-3 BA)
This is a single course with two codes, offered to both advanced undergraduate students (Chem 482) and graduate students (Chem 544). Although chemical biology and biological chemistry are not identical, they are two intermingled fields, and this course will focus on using “chemical biology” for the most part. Research in chemical biology aims to investigate, manipulate, or mimic biological systems by means of molecular tools. Design principles of such research are geared towards understanding a complex biological phenomenon or developing platforms that can display functions useful for biotechnology or medicine. This course will teach the fundamentals (both theory and technique) of chemical biology and the research strategies from a chemist’s perspective. Prerequisites: 01:160:308 or 01:160:316; 11:115:403 or 01:694:407, or permission from instructor

16:160:546 - Chemical Separations

16:160:546  Chemical Separations (3)
Principles of chemical separations by various chromatographic techniques. Prerequisite: 01:160:348 or equivalent.

16:160:548 - Special Analytical Methods

16:160:548  Special Analytical Methods (3)
Advanced topics in analytical chemistry. Prerequisite: 01:160:348 or equivalent.

16:160:549 - Electroanalytical Chemistry

16:160:549 Electroanalytical Chemistry (3)
Application of electrochemical principles and techniques, including modern polarographic methods, voltammetry, potentiometry, and chronopotentiometry. Prerequisite: 01:160:348 or equivalent.

16:150:550 - Computational Chemistry

16:150:550 Computational Chemistry (3)
One-semester physical chemistry course, covering the theory and practice of computational explorations in chemistry and biochemistry. Prerequisite: 01:160:327/328, 341/342, or equivalent. 

16:160:551 - Analytical Spectroscopy

16:160:551 Analytical Spectroscopy (3)
Theory of spectroscopy and spectrophotometry, including the analytical applications of spectrochemical methods. Prerequisite: 01:160:348 or equivalent.

16:160:571 - Advanced Inorganic Chemistry

16:160:571 Advanced Inorganic Chemistry (3)
Survey of bonding, electronic-structural, and magnetic properties of transition metal complexes, followed by a survey of the kinetics and mechanisms by which such materials undergo substitution, isomerization, and redox reactions.Prerequisite: 01:160:371 or equivalent.

16:160:575 - Principles of Organometallic Chemistry

16:160:575 Principles of Organometallic Chemistry (3)
Detailed survey of the mechanisms of organometallic reactions. Prerequisites: 01:160:307, 308, 371, or equivalent.

16:160:576 - Bioinorganic Chemistry

16:160:576Bioinorganic Chemistry (3)
Spectroscopic, chemical, and other properties of metal-containing biological systems such as hemoglobin, vitamin B12, and carboxypeptidase. Prerequisite: 01:160:371 or equivalent.

16:160:577 - Solid-State Chemistry

16:160:577 Solid-State Chemistry (3)
Relation between crystal structure, bonding and physical properties of solids, imperfections in solids; nonstoichiometric compounds; electronic and magnetic properties of various types of solids; transformation in solids; solid-state reactions; crystal growth; solid-state electrochemistry. Prerequisites: 01:160:371, 421, or equivalent.

16:160:579 - Special Topics in Inorganic Chemistry

16:160:579 Special Topics in Inorganic Chemistry (BA)
Advanced topics of current interest. Prerequisite: 01:160:371 or equivalent.

16:160:580 - Structural Biology, Structural Biophysics, and Chemical Biology of Transcription

16:160:580 Structural Biology, Structural Biophysics, and Chemical Biology of Transcription (3)
Structure and mechanism. Prerequisites: 01:160:305, 306, 307, 308, 315, 316, 323, 324, 327, 328, 342, or equivalent.

16:160:582 - Chemical Biology

16:160:582 Chemical Biology (3)

Chemical biology is an emerging and exciting field at the interface of chemistry and biology. Research in chemical biology aims to investigate, manipulate, or mimic biological systems by means of molecular tools. Design principles of such research are geared towards understanding a complex biological phenomenon or developing platforms that can display functions useful for biotechnology or medicine. This course will teach the fundamentals (both theory and technique) of chemical biology and the research strategies from a chemist’s perspective. 01:160:308 or 01:160:316; 11:115:403 or 01:694:407, or permission from instructor.

16:160:601-602 - Independent Studies in Chemistry

16:160:601-602 Independent Studies in Chemistry (BA)
Individualized instruction supervised by a faculty member.

16:160:603 - Introduction to Research

16:160:603 Introduction to Research (1)
Introduction to doctoral and postdoctoral research in chemistry. Identification of research problems. Presentation of research results. Use of chemical literature. Research proposals and funding. Research ethics. Enrollment restricted to first year Ph.D. students.

16:160:60 - Laboratory Rotation in Chemistry I, II

16:160:605 Laboratory Rotation in Chemistry I, II (BA)
Introduction to the techniques of chemical research through participation in research projects of selected members of the graduate faculty. Enrollment restricted to Ph.D. students. No more than a total of 6 credits of laboratory rotation can be earned.

16:160:606 - Laboratory Rotation in Chemistry I, II

16:160:606 Laboratory Rotation in Chemistry I, II (BA)
Introduction to the techniques of chemical research through participation in research projects of selected members of the graduate faculty. Enrollment restricted to Ph.D. students. No more than a total of 6 credits of laboratory rotation can be earned.

16:160:607-608 - Research Colloquium in Chemistry

16:160:607-608 Research Colloquium in Chemistry (1)
Students attend weekly lectures by visiting scientists on current research in chemistry and chemical biology; a research paper is required on one or more of the topics covered.

16:160:611 - Seminar in Chemistry [CARL]

16:160:611 Seminar in Chemistry [CARL] (1)
Student seminars on out of field research topics in chemistry. Enrollment restricted to second year Ph.D. candidates.

16:160:612 - Seminar in Chemistry [IFRP]

16:160:612  Seminar in Chemistry [IFRP] (1)
Student seminars on in field research topics in chemistry. Enrollment restricted to second year Ph.D. candidates.

16:160:701-702 - Research in Chemistry

16:160:701-702 Research in Chemistry (BA)